Browse of TCMCG011C09643 protein

CDS

Accession Number	TCMCG011C09643
gbkey	CDS
Protein Id	XP_021893901.1
Location	complement(join(99632..99739,99823..99906,100001..100231,100311..100466,100555..100651,101739..101915,102006..102385,103346..103444,103701..103884,103984..104129,104571..104631,104952..105600,106668..106815,106892..106966,107146..107296,110446..110546,110635..110718,110885..111033,111118..111286,111781..111882,111988..112062,112163..112243,112341..112447,112809..112874,112972..113117,113525..113659,114475..114611,115523..115597,115717..115902,116233..116355,116443..116556,121609..121701,124494..124565,124656..124778,124914..125032,126272..126371,131484..131657,131771..131914,135488..135696,136741..136891))
Gene	LOC110811658
GeneID	110811658
Organism	Carica papaya

Protein

Length	1926aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA264084
db_source	XM_022038209.1
Definition	rRNA biogenesis protein RRP5 isoform X1 [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTGGACCTTCTAAGAAATATTTGAAGAAAAAACCTATAGAGACTTCAAAGTTGAACAAAACATCAAAGAAATCATTCAAAACAAAGAAGGAACCAAAGGAAGCTGTTCAGTTGCAGCTTGAAGATGATGTTCCTGACTTCCCTAGAGGTGGAGGGAGTTATTTAACCCAACAAGAACGAGATGAAATTAGGGCTGAAGTTGATGCTGAATTTGAGGCAGAGGATCGAGGTTTAAAGAATAAAAGGAGGAAAAAGATGCAGAAAAAAAGTCAAACAGAAGATGATGATTTCAGTTCCCTTTTTGGTGGTGGTATTACTGGAAAACTACCTAGATTTGCCAATAAAATAACATTGAAGAATATATCTCCTGGAATGAAGCTTTGGGGAGTTGTTGCTGAAGTAAATGAGAAAGACCTCGTGATCAGCTTGCCAGGGGGCTTACGTGGATTGGTTCGTGTTTGTGATGCATTTGATCCTGTCTTGGATAATGGAATCAAGGTGGATGGTGAAGGTAGTCTTCTTCCGGCCGTATTTTCACCAGGGCAGCTTGTTTCTTGTGTTGTGTTGCAATTAGATGGTGATAAAAAAGAGAGTGTGAAAAGGAAGATTTGGCTTTCTTTGCGTCTCTCTTTGTTGCACAAAGGCTTAACTTTGGATGCTGTTCAGGAGGGGATGGTCTTAACTGCATATGTGAAAAGTATTGAAGATCATGGCTACATTCTTCATTTTGGATTGCCTTCTTTTTCAGGATTTTTATCAAAAAAAGGCCAAGCTGAAAATGGAGAGAATGAATTAAAGACCGGAAAACTCTTACAAGGGGTTGTTAAAAGTGTTGATAAAATGCGTAAAGTTGTTTACCTGAGTTCTGATCCGTCTGTGGTGGCTAAAACTGTAACAAAGGATATTAAGGGCATCTCAATTGATCTTCTAATTCCAGGCGTGATGGTTAATGCCCGTGTGCATTCTGTACTTCAAAATGGAATTATGTTGTCATTTCTTACATACTTCACTGGAACTGTTGACATATTCCATCTGCAAAATCCATTTTCCACCAAAAAGTGGCAGGATGATTATATTCAAAATAAGAAGGTTAATGCTCGTATCCTATTTGTGGATCCATCGACTAGAGCAGTTGGCCTGACTTTGAATCCTCATCTTGTCCATAACAAGGCTCCTCCTTTACATGTTACGACTGGGGATATATATGATCAATCAAAAATAGTCCGAGTTGACAGAGGATTGGGCCTTCTTCTTGATATTCCTTCTGCTCCAGCATCAACTCCAGCATATGCTAATATATTTGATGTGGCTGAGGATGACGTCCGGAAACTAGATAAAAAGTTCAAGGAAGGGAGCTGTGTTCGTGTTCGAATTCTTGGGTTCAGACACTTGGAGGGACTTGCTACTGGGATTTTGAAGGAAAGTGCTTTTGAGGGGCCAGTATTCACCCATTCGGATGTCAAGCCTGGAATGGTGGTGAGAGCTAAAGTTACAGCCGTTGACAGCTTTGGTGCAATTGTGCAATTTCCTGGTGGTGTGAAGGCACTTTGTCCTCTCCGACATATGTCTGAGTTTGAAATTTCAAAGCCTGGAAAAAAATTTAAGGTTGGTGCTGAATTGGTGTTCCGGGTTCTTGGATGTAAGTCTAAGAGAATAACGGTTACCCACAAGAAAACACTTGTGAAATCGAAACTTCCAATTTTAAGTTCATACGCAGATGCAACTGACGGGTTATTGACACATGGATGGATAACAAAGATTGAAAAACATGGATGCTTTGTCCGGTTTTATAATGGAGTCCAAGGATTTGTTCCCAGACATGAACTTGGGCTAGAACCTGGGAGTGATCCAAGTTCTTTGCATCATGTTGGAGAAGTTGTCAAATGTAGAATAACTGGTTCTGTTCCTGCTTTACGGAGGATCAACCTTAGCTTGATAACAAAGCCTCTAAGGGTTTCTGAAGATGATGCAATCAAGTTAGGTAGCCTTATTTCCGGAGTTGTTGATATTGTTACTCCCCATGCAGTAATTGTTCGTGTTAATTCAAACGGTTACTTAAAGGGTACAATTTCTACTGAACATTTGGCAGATCGACATGAGCAAGCAACTTTGATGAAGTCGGTTCTAAAGCCTGGATATGAGTTTGATCAGTTACTAATACTAGATATTGAAGGCAACAATTTACTACTGTCCGCAAAGAACTCCCTTGTCAATTCAGCTCAAGACCTTCCTTCTGATCTGAGCCAGATTCGCCCTAACTCAGTTGTTCATGGGTATATCTGTAACTTGATTGAGACGGGTTGCTTTGTTCGTTTTCTTGGTCGTTTAACTGGTTTCTCCCCGAGAAGCAAGGCAATGGATGAACTGAAAGTTAATATTTCAGAAGCCTTTTACATTGGGCAATCTGTTCGCAGTAATGTACTTGAGGTTAATGCTGATGCAGGTAGAGTAACACTTTCGCTGAAGCAGTCATGCTGCTCTTCAACAGATGCATCTTTTATACAAGAATATTTTCTGTTGGATGAAAAGATTACTAAGCTGCAATTATCAGGCTCTAAGAGTTCCGGGTTAAAGTGGCTGGAAGGATTTGAAATTGGCAGCATTGTTGAGGGAAGAGTACTGGAGGCAAAGGATGTTGGAATTGTTGTCAGTTTCGAGGAATATAGCGATGTTGTTGGTTTTATTGCCCATAATCAATTACCACCTGGAAATATTTTGGAACCAGGCTCTGTTGTTGAGGCTGTGGTTTTAGATGTTGGCAAGACTGAATGCCTTGTCGAATTATCTCTGAAGCCCGAGTTCATTAATAAATCAGAGAAAGAGAAATCTCGCAAAGAAGCTAAGAAGAAGCGGAAAAGGGAAGAACCGAAGGAGTTGGAGTTGTATCAGACAGTGAATGCAATTGTGGAAATAGTGAAGGAGCATTACTTGGTTCTGTCGATTCCAGAGTATAACTATGCTATAGGATATGCTTCGATATCAGACTATAACACGCAGAAGTTGCCACGAAGAGAGTTTTTAAATAGACAAAGTGTCAGTGCCACTGTTGTGGCTCTTCCAAGCCCTTCAATTGCAGGAAGGTTGCTTTTGCTTCTTAAATCAAGTGCGGTTTCTGAGACATCCAGTTCAAAAAGGGCCAAAAGGAAGTCCACCTACAGTATTGGATCACTGGTGCAGGCTGAGATTATTGAAATCAAGCCTCTTGAACTAAGAGTGAAATTTGGAATTGGCTTCCATGGGCGGGTTCATATAACAGAGGTTAATGATTCAAATGATTCAGAAGAGCCATTTAGTGACTTCAGAATTGGGCAAACTGTAACTGCAAGGATTGTTGCAAAGGCTAAACGATCAGATAATAAAAGAGGCTGCCGGTGGGAGCTGTCTATAAAACCTAAAGTTCTTTCAGGTTCCATTGAGGTGGGGGGTGATGTAGAGACTGAGAAATTTGAGTTTGCAACTGGACAAAGCATCACTGGATATGTTTATAAGGTGGACAGTGAATGGGCTTGGTTAACAGTTTCTCGACATGTGAGGGCTCAGCTATTTATTCTTGACACTGCATGTGAACCTAATGAACTTGAAGAATTCCAGAAACGTTTCTATGTGGGGAGGGTTGTCTCTGGTAATGTTTTAACTGCAAACAAAGTGAAGAATCTGCTGCGATTAGTTCAACGTCCTTTAGGCAATTCTCATAGACTGATTGGTGAAAAAGATAGGAAGATGGATAAATTAGACAATAATGTGTTTCGTGAGGATGTAACTGCTCATATTCATGGAGGAGATATTTTGGGTGGTAGAATTTCCAAAATACTGGCAGGTGTTGGTGGATTACTTGTGCAAATTGGTCCTTACACATATGGAAAGGTTCACTTTACTGAACTTAAAGACTCATGGGTCCCTGATCCAATATCTGCGTACCATGAAGGGCAGTTTGTCAAATGCAAGGTCCTAGAAATTGGTCGCTCAGTCAAGGGGACTGTTCATGTTGATCTATCATTACGTTCATCTTTAGATGGTATGCTTTGCCGGAATTCCTCTGAACCTCGCATCGACGTTGATAATCCTAGCAGGCGTATTGAGCGTATTGAGGGCCTATCTTCTAATAGGGTTGTGCAGGGTTATGTGAAGAATGTTATGTCGAAAGGATGTTTTATTATGCTTTCGCGGAAGGTTGACGCGAAGGTTCTTCTATCAAATTTATCTGATGGTTTTGTTGACAGCCCTGAAAAAGAATTTCCTATTGGTAAACTTGTTACTGGGAGGGTTCTAAGCGTGGAGCCTCTATCTCAGCGAGTTGAAGTGACATTGAAAACCTTGGATGCCAGCGGTGCACCAAAATCTCATATCAATGATTTAAGGAGCCTGCACGCTGGAGATATAATTTCTGGCCGGATTAAGCGGGTGGAGCCGTATGGTCTATTTATTACAATTGAAAACACAAACATGGTTGGATTATGCCATGTGTCTGAGCTATCTGATGATCATATTGACAAAATTGAGGCGAGATACAGTGCTGGAGAGAACGTTAAAGCAAAGATATTGAAGGTGGATGAGGAAAGACACCGGGTTTCTCTTGGAATGAAGGGGTCATATTTGAGGGATAATATTGACCTTCAGATGTCTCCAAAACAAGAGTCTAAGGAAGCTGTTACAGAAGATGGTTCTGGTGAGGGCAACATTACGTTTCAGGAAAGTGGTGCAAATGGGGTCCAAATGACAGATGCTTTATGTGAAAAGGAAGCATCCCTGGTTCTTGCACAAATGGAATCAAGGGCCTCAGTTCCTCCCCTTGATGTCACTCTTGATGACAGAGAGCATTCTGAGGATGATAATTTACCTTGTCAAAGTCAAAAACTTATTAAAGAAGCAGATGCCGTAGATGAGAGGAAGGACAGATGGGAAAAGAAGAAAGCAAAGGAGGAGAGGGAGCAAGAAATTAGAGTTGCTGAGGAAAGACTGCTGGAGAAGGATGTCCCTAGGACTGCTGATGAATTTGAGAAATTGGTCAGAAGTTCTCCTAATAGCAGTTTTGTTTGGATAAAATACATGGCCTTCATGCTCTCTTTGGCTGATGTTGAGAAAGCCCGATCTATTGCTGAAAGGGCCTTGAGGACAATAAATATTCGAGAAGAGAATGAAAAGCTGAACATCTGGGTGGCTTATTTTAATTTGGAAAATGAATATGGAACTCCTCCGGAGGAAGCGGTGGTGAAAGTATTTCAAAGAGCATTACAGTACTGTGATCTCAAAAAAGTTCACATAGCTCTATTAGGAATGTATGAGAGGACTGAGCAGCATAAGTTGGCTGACGAGCTTCTTGACAAAATGATTAAGAAGTTTAAGAATTCAAGCAAGGTTTGGTTGCGGCGTGTACAAAGACTCTTGAAGCAAAATCAGGATGGCGTTCAGTCTGTTGTAAACCGTGCTTTATTAAGCCTTCCTCGCCATAAGCATATTAAGTTCATTTCACAGACAGCAATACTTGAGTTCAAATGTGGGGTTCCTGACCGAGGGCGATCGATGTTTGAAGGGATTTTACGGGAGTACCCAAAAAGAACAGACTTATGGAGTGTCTATCTTGATCAAGAGATTCGACTTGGAGATGTCGAAGTGATTCGTGGATTATTTGAGAGAGCTATTAGCTTGAGCCTTCCACCAAAAAAGATGAAGTTCTTATTCAAGAAATACCTTGAGTACGAAAAATCTCTTGGTGATGAGAAACAGATTGAATCTGTCAAACAGAAAGCAATTGATTATGTCGAGAGCACATTGGCCTAA

Protein:   MAGPSKKYLKKKPIETSKLNKTSKKSFKTKKEPKEAVQLQLEDDVPDFPRGGGSYLTQQERDEIRAEVDAEFEAEDRGLKNKRRKKMQKKSQTEDDDFSSLFGGGITGKLPRFANKITLKNISPGMKLWGVVAEVNEKDLVISLPGGLRGLVRVCDAFDPVLDNGIKVDGEGSLLPAVFSPGQLVSCVVLQLDGDKKESVKRKIWLSLRLSLLHKGLTLDAVQEGMVLTAYVKSIEDHGYILHFGLPSFSGFLSKKGQAENGENELKTGKLLQGVVKSVDKMRKVVYLSSDPSVVAKTVTKDIKGISIDLLIPGVMVNARVHSVLQNGIMLSFLTYFTGTVDIFHLQNPFSTKKWQDDYIQNKKVNARILFVDPSTRAVGLTLNPHLVHNKAPPLHVTTGDIYDQSKIVRVDRGLGLLLDIPSAPASTPAYANIFDVAEDDVRKLDKKFKEGSCVRVRILGFRHLEGLATGILKESAFEGPVFTHSDVKPGMVVRAKVTAVDSFGAIVQFPGGVKALCPLRHMSEFEISKPGKKFKVGAELVFRVLGCKSKRITVTHKKTLVKSKLPILSSYADATDGLLTHGWITKIEKHGCFVRFYNGVQGFVPRHELGLEPGSDPSSLHHVGEVVKCRITGSVPALRRINLSLITKPLRVSEDDAIKLGSLISGVVDIVTPHAVIVRVNSNGYLKGTISTEHLADRHEQATLMKSVLKPGYEFDQLLILDIEGNNLLLSAKNSLVNSAQDLPSDLSQIRPNSVVHGYICNLIETGCFVRFLGRLTGFSPRSKAMDELKVNISEAFYIGQSVRSNVLEVNADAGRVTLSLKQSCCSSTDASFIQEYFLLDEKITKLQLSGSKSSGLKWLEGFEIGSIVEGRVLEAKDVGIVVSFEEYSDVVGFIAHNQLPPGNILEPGSVVEAVVLDVGKTECLVELSLKPEFINKSEKEKSRKEAKKKRKREEPKELELYQTVNAIVEIVKEHYLVLSIPEYNYAIGYASISDYNTQKLPRREFLNRQSVSATVVALPSPSIAGRLLLLLKSSAVSETSSSKRAKRKSTYSIGSLVQAEIIEIKPLELRVKFGIGFHGRVHITEVNDSNDSEEPFSDFRIGQTVTARIVAKAKRSDNKRGCRWELSIKPKVLSGSIEVGGDVETEKFEFATGQSITGYVYKVDSEWAWLTVSRHVRAQLFILDTACEPNELEEFQKRFYVGRVVSGNVLTANKVKNLLRLVQRPLGNSHRLIGEKDRKMDKLDNNVFREDVTAHIHGGDILGGRISKILAGVGGLLVQIGPYTYGKVHFTELKDSWVPDPISAYHEGQFVKCKVLEIGRSVKGTVHVDLSLRSSLDGMLCRNSSEPRIDVDNPSRRIERIEGLSSNRVVQGYVKNVMSKGCFIMLSRKVDAKVLLSNLSDGFVDSPEKEFPIGKLVTGRVLSVEPLSQRVEVTLKTLDASGAPKSHINDLRSLHAGDIISGRIKRVEPYGLFITIENTNMVGLCHVSELSDDHIDKIEARYSAGENVKAKILKVDEERHRVSLGMKGSYLRDNIDLQMSPKQESKEAVTEDGSGEGNITFQESGANGVQMTDALCEKEASLVLAQMESRASVPPLDVTLDDREHSEDDNLPCQSQKLIKEADAVDERKDRWEKKKAKEEREQEIRVAEERLLEKDVPRTADEFEKLVRSSPNSSFVWIKYMAFMLSLADVEKARSIAERALRTINIREENEKLNIWVAYFNLENEYGTPPEEAVVKVFQRALQYCDLKKVHIALLGMYERTEQHKLADELLDKMIKKFKNSSKVWLRRVQRLLKQNQDGVQSVVNRALLSLPRHKHIKFISQTAILEFKCGVPDRGRSMFEGILREYPKRTDLWSVYLDQEIRLGDVEVIRGLFERAISLSLPPKKMKFLFKKYLEYEKSLGDEKQIESVKQKAIDYVESTLA